Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CD40LGP29965 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CD40LGP29965 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.4□□□□□ -0.1
CD40LGP29965 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CD40LGP29965 REXO1L1P-202ENST00000608646 1974 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CD40LGP29965 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.4□□□□□ -0.1
CD40LGP29965 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CD40LGP29965 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.39□□□□□ -0.11
CD40LGP29965 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 MYO15B-237ENST00000642007 4893 ntBASIC14.39□□□□□ -0.11
CD40LGP29965 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.39□□□□□ -0.11
CD40LGP29965 RASA4DP-201ENST00000460726 1199 ntBASIC14.39□□□□□ -0.11
CD40LGP29965 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.39□□□□□ -0.11
CD40LGP29965 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.39□□□□□ -0.11
CD40LGP29965 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.39□□□□□ -0.11
CD40LGP29965 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.39□□□□□ -0.11
CD40LGP29965 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD40LGP29965 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 AC090616.6-203ENST00000579186 1945 ntBASIC14.39□□□□□ -0.11
CD40LGP29965 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40LGP29965 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD40LGP29965 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD40LGP29965 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CD40LGP29965 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40LGP29965 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CD40LGP29965 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 AC103564.2-201ENST00000432853 1299 ntBASIC14.38□□□□□ -0.11
CD40LGP29965 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40LGP29965 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.38□□□□□ -0.11
CD40LGP29965 AL441883.1-201ENST00000566170 1045 ntBASIC14.38□□□□□ -0.11
CD40LGP29965 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.38□□□□□ -0.11
CD40LGP29965 AC005332.3-201ENST00000589904 676 ntBASIC14.38□□□□□ -0.11
CD40LGP29965 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CD40LGP29965 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CD40LGP29965 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD40LGP29965 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms