Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 AC126177.1-201ENST00000547829 2218 ntBASIC14.86□□□□□ -0.03
SHC1P29353 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 AC010491.1-201ENST00000563101 2797 ntBASIC14.86□□□□□ -0.03
SHC1P29353 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.86□□□□□ -0.03
SHC1P29353 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SHC1P29353 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 AC004461.1-201ENST00000412461 403 ntBASIC14.86□□□□□ -0.03
SHC1P29353 SPCS2P4-201ENST00000436160 681 ntBASIC14.86□□□□□ -0.03
SHC1P29353 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.86□□□□□ -0.03
SHC1P29353 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 AL596442.2-201ENST00000610240 980 ntBASIC14.86□□□□□ -0.03
SHC1P29353 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 AC006538.3-201ENST00000612495 578 ntBASIC14.86□□□□□ -0.03
SHC1P29353 AL513210.1-201ENST00000629608 234 ntBASIC14.86□□□□□ -0.03
SHC1P29353 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SHC1P29353 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.86□□□□□ -0.03
SHC1P29353 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHC1P29353 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SHC1P29353 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SHC1P29353 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SHC1P29353 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 DNAJB3-202ENST00000449667 1266 ntBASIC14.85□□□□□ -0.03
SHC1P29353 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 FAM86C2P-203ENST00000528684 1004 ntBASIC14.85□□□□□ -0.03
SHC1P29353 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.85□□□□□ -0.03
SHC1P29353 AL603832.2-201ENST00000566195 2125 ntBASIC14.85□□□□□ -0.03
SHC1P29353 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.85□□□□□ -0.03
SHC1P29353 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.85□□□□□ -0.03
SHC1P29353 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.85□□□□□ -0.03
SHC1P29353 AC020765.3-201ENST00000613051 740 ntBASIC14.85□□□□□ -0.03
SHC1P29353 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.85□□□□□ -0.03
SHC1P29353 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SHC1P29353 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHC1P29353 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.85□□□□□ -0.03
SHC1P29353 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.85□□□□□ -0.03
SHC1P29353 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.84□□□□□ -0.03
SHC1P29353 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms