Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
EPHA3P29320 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA3P29320 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 AKR1C7P-201ENST00000305623 895 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
EPHA3P29320 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 RNU1-129P-201ENST00000384064 167 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 HAUS4P1-201ENST00000406739 1145 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA3P29320 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA3P29320 IGHV3-65-201ENST00000523210 341 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.77■□□□□ 0.12
EPHA3P29320 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.77■□□□□ 0.12
EPHA3P29320 U1.21-201ENST00000580816 167 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 AC021097.1-201ENST00000607902 574 ntBASIC15.77■□□□□ 0.12
EPHA3P29320 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA3P29320 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA3P29320 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
EPHA3P29320 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHA3P29320 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHA3P29320 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.77■□□□□ 0.11
EPHA3P29320 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.77■□□□□ 0.11
EPHA3P29320 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.77■□□□□ 0.11
EPHA3P29320 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
EPHA3P29320 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
EPHA3P29320 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 TSPY19P-201ENST00000418461 509 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 RPS2P1-201ENST00000434010 821 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 TSPY18P-201ENST00000441642 509 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.76■□□□□ 0.11
EPHA3P29320 AF238378.1-201ENST00000526806 358 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 AC091304.2-201ENST00000564639 760 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 OR7E47P-204ENST00000575924 449 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.76■□□□□ 0.11
EPHA3P29320 MIR4515-201ENST00000584082 81 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.76■□□□□ 0.11
EPHA3P29320 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
EPHA3P29320 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.76■□□□□ 0.11
EPHA3P29320 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.76■□□□□ 0.11
EPHA3P29320 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
EPHA3P29320 FAM45BP-202ENST00000592932 1624 ntBASIC15.76■□□□□ 0.11
EPHA3P29320 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
EPHA3P29320 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
EPHA3P29320 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms