Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VAMP1P23763 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.73□□□□□ -0.21
VAMP1P23763 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.73□□□□□ -0.21
VAMP1P23763 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
VAMP1P23763 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 AC139749.1-202ENST00000617529 3139 ntBASIC13.73□□□□□ -0.21
VAMP1P23763 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VAMP1P23763 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.73□□□□□ -0.21
VAMP1P23763 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC004817.3-201ENST00000602957 2129 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.72□□□□□ -0.21
VAMP1P23763 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 TSPY22P-201ENST00000427496 604 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.72□□□□□ -0.21
VAMP1P23763 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC010203.1-204ENST00000548782 407 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.72□□□□□ -0.21
VAMP1P23763 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.72□□□□□ -0.21
VAMP1P23763 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.72□□□□□ -0.21
VAMP1P23763 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.72□□□□□ -0.21
VAMP1P23763 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC090616.6-201ENST00000582640 721 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.72□□□□□ -0.21
VAMP1P23763 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.72□□□□□ -0.21
VAMP1P23763 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.72□□□□□ -0.21
VAMP1P23763 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.72□□□□□ -0.21
VAMP1P23763 CICP24-201ENST00000605464 2705 ntBASIC13.72□□□□□ -0.21
VAMP1P23763 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.72□□□□□ -0.21
VAMP1P23763 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VAMP1P23763 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VAMP1P23763 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.71□□□□□ -0.21
VAMP1P23763 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VAMP1P23763 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.71□□□□□ -0.21
VAMP1P23763 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 LINC00538-201ENST00000626109 1906 ntBASIC13.71□□□□□ -0.21
VAMP1P23763 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
VAMP1P23763 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 KRT18P38-201ENST00000449496 1282 ntBASIC13.71□□□□□ -0.21
VAMP1P23763 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 VENTXP7-201ENST00000475503 772 ntBASIC13.71□□□□□ -0.21
VAMP1P23763 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC13.71□□□□□ -0.21
VAMP1P23763 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.71□□□□□ -0.21
VAMP1P23763 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.71□□□□□ -0.21
VAMP1P23763 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.71□□□□□ -0.21
VAMP1P23763 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.71□□□□□ -0.21
VAMP1P23763 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VAMP1P23763 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms