Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC099398.1-201ENST00000567919 2776 ntBASIC16.31■□□□□ 0.2
XPAP23025 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.31■□□□□ 0.2
XPAP23025 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
XPAP23025 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.31■□□□□ 0.2
XPAP23025 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.31■□□□□ 0.2
XPAP23025 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.31■□□□□ 0.2
XPAP23025 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.31■□□□□ 0.2
XPAP23025 INGX-202ENST00000489074 768 ntBASIC16.31■□□□□ 0.2
XPAP23025 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.31■□□□□ 0.2
XPAP23025 MIR4321-201ENST00000592276 80 ntBASIC16.31■□□□□ 0.2
XPAP23025 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.31■□□□□ 0.2
XPAP23025 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 PCDHA14-201ENST00000506751 2298 ntBASIC16.31■□□□□ 0.2
XPAP23025 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.31■□□□□ 0.2
XPAP23025 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XPAP23025 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.31■□□□□ 0.2
XPAP23025 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 AL592424.1-201ENST00000563624 1536 ntBASIC16.3■□□□□ 0.2
XPAP23025 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.3■□□□□ 0.2
XPAP23025 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.3■□□□□ 0.2
XPAP23025 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.3■□□□□ 0.2
XPAP23025 AL139010.1-201ENST00000454878 894 ntBASIC16.3■□□□□ 0.2
XPAP23025 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.3■□□□□ 0.2
XPAP23025 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.3■□□□□ 0.2
XPAP23025 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 REXO1L8P-201ENST00000604378 1897 ntBASIC16.3■□□□□ 0.2
XPAP23025 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
XPAP23025 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.3■□□□□ 0.2
XPAP23025 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
XPAP23025 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XPAP23025 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
XPAP23025 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.29■□□□□ 0.2
XPAP23025 AC097493.3-201ENST00000509725 367 ntBASIC16.29■□□□□ 0.2
XPAP23025 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.29■□□□□ 0.2
XPAP23025 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.29■□□□□ 0.2
XPAP23025 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms