Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.24□□□□□ -0.13
ATF1P18846 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 AC105339.3-201ENST00000560043 636 ntBASIC14.24□□□□□ -0.13
ATF1P18846 CLEC4GP1-201ENST00000596555 870 ntBASIC14.24□□□□□ -0.13
ATF1P18846 AL356488.2-201ENST00000602755 427 ntBASIC14.24□□□□□ -0.13
ATF1P18846 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ATF1P18846 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 AC008677.1-201ENST00000519230 1561 ntBASIC14.24□□□□□ -0.13
ATF1P18846 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 CICP13-201ENST00000422015 2789 ntBASIC14.24□□□□□ -0.13
ATF1P18846 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
ATF1P18846 SNX18-202ENST00000343017 3140 ntBASIC14.24□□□□□ -0.13
ATF1P18846 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 AC106881.1-201ENST00000605849 3329 ntBASIC14.23□□□□□ -0.13
ATF1P18846 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.23□□□□□ -0.13
ATF1P18846 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.23□□□□□ -0.13
ATF1P18846 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.23□□□□□ -0.13
ATF1P18846 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.23□□□□□ -0.13
ATF1P18846 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.23□□□□□ -0.13
ATF1P18846 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.23□□□□□ -0.13
ATF1P18846 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.23□□□□□ -0.13
ATF1P18846 AC005593.1-201ENST00000624894 515 ntBASIC14.23□□□□□ -0.13
ATF1P18846 AC012569.1-201ENST00000591191 1524 ntBASIC14.23□□□□□ -0.13
ATF1P18846 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATF1P18846 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ATF1P18846 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATF1P18846 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
ATF1P18846 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATF1P18846 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.22□□□□□ -0.13
ATF1P18846 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.22□□□□□ -0.13
ATF1P18846 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 AC005622.1-201ENST00000636801 1703 ntBASIC14.22□□□□□ -0.13
ATF1P18846 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.22□□□□□ -0.13
ATF1P18846 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.22□□□□□ -0.13
ATF1P18846 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.22□□□□□ -0.13
ATF1P18846 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ATF1P18846 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.22□□□□□ -0.13
ATF1P18846 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATF1P18846 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms