Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 TFAMP1-201ENST00000412727 736 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 AL671277.1-201ENST00000429656 993 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 AC098859.1-201ENST00000502915 1238 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.35□□□□□ -0.11
CTLA4P16410 AC105233.2-201ENST00000523697 349 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 AF228730.5-201ENST00000530288 346 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.35□□□□□ -0.11
CTLA4P16410 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.35□□□□□ -0.11
CTLA4P16410 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.35□□□□□ -0.11
CTLA4P16410 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.35□□□□□ -0.11
CTLA4P16410 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 TSPY26P-202ENST00000565928 3884 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 AP001282.1-201ENST00000531301 1499 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 ADH5P3-201ENST00000433842 1137 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.34□□□□□ -0.11
CTLA4P16410 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
CTLA4P16410 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
CTLA4P16410 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 AC040169.1-201ENST00000565382 521 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 AC027307.2-201ENST00000591252 911 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 SPTSSB-204ENST00000617024 1292 ntBASIC14.34□□□□□ -0.11
CTLA4P16410 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CTLA4P16410 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.34□□□□□ -0.11
CTLA4P16410 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTLA4P16410 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTLA4P16410 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.34□□□□□ -0.11
CTLA4P16410 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.34□□□□□ -0.11
CTLA4P16410 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
CTLA4P16410 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTLA4P16410 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.33□□□□□ -0.12
CTLA4P16410 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.33□□□□□ -0.12
CTLA4P16410 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTLA4P16410 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.33□□□□□ -0.12
CTLA4P16410 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.33□□□□□ -0.12
CTLA4P16410 AC008267.7-201ENST00000624570 1194 ntBASIC14.33□□□□□ -0.12
CTLA4P16410 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CTLA4P16410 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms