Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NCK1P16333 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.33■□□□□ 0.04
NCK1P16333 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.33■□□□□ 0.04
NCK1P16333 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.33■□□□□ 0.04
NCK1P16333 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.33■□□□□ 0.04
NCK1P16333 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.33■□□□□ 0.04
NCK1P16333 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.33■□□□□ 0.04
NCK1P16333 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.33■□□□□ 0.04
NCK1P16333 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.33■□□□□ 0.04
NCK1P16333 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
NCK1P16333 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.33■□□□□ 0.04
NCK1P16333 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NCK1P16333 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.33■□□□□ 0.04
NCK1P16333 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCK1P16333 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.32■□□□□ 0.04
NCK1P16333 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NCK1P16333 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 AC091951.1-201ENST00000512854 2465 ntBASIC15.32■□□□□ 0.04
NCK1P16333 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.32■□□□□ 0.04
NCK1P16333 FGFR3P6-201ENST00000457012 610 ntBASIC15.32■□□□□ 0.04
NCK1P16333 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.32■□□□□ 0.04
NCK1P16333 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 AL355877.3-201ENST00000622820 899 ntBASIC15.32■□□□□ 0.04
NCK1P16333 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.32■□□□□ 0.04
NCK1P16333 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NCK1P16333 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.32■□□□□ 0.04
NCK1P16333 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 AC129492.6-201ENST00000611383 1305 ntBASIC15.32■□□□□ 0.04
NCK1P16333 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
NCK1P16333 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.32■□□□□ 0.04
NCK1P16333 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NCK1P16333 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCK1P16333 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
NCK1P16333 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
NCK1P16333 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCK1P16333 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.31■□□□□ 0.04
NCK1P16333 ATP5G2P1-201ENST00000433580 426 ntBASIC15.31■□□□□ 0.04
NCK1P16333 RPS15P9-201ENST00000494093 319 ntBASIC15.31■□□□□ 0.04
NCK1P16333 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.31■□□□□ 0.04
NCK1P16333 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms