Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 BX842568.4-201ENST00000421222 227 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 DNAJB3-201ENST00000446806 729 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC098859.1-201ENST00000502915 1238 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AP000842.3-202ENST00000569238 1080 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 MIR4321-201ENST00000592276 80 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AL365330.1-201ENST00000607459 531 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AC008677.1-201ENST00000519230 1561 ntBASIC14.51□□□□□ -0.09
HLA-DOBP13765 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 MIR346-201ENST00000362234 95 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 RPSAP43-201ENST00000402237 625 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 GPX1P2-201ENST00000429271 606 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AL592309.1-201ENST00000443127 649 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC105339.1-204ENST00000636249 355 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 AC068587.6-202ENST00000641839 5619 ntBASIC14.5□□□□□ -0.09
HLA-DOBP13765 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms