Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.05■□□□□ 0.32
KRT3P12035 GPX1P2-201ENST00000429271 606 ntBASIC17.05■□□□□ 0.32
KRT3P12035 AL592309.1-201ENST00000443127 649 ntBASIC17.05■□□□□ 0.32
KRT3P12035 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.05■□□□□ 0.32
KRT3P12035 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.05■□□□□ 0.32
KRT3P12035 MIR3687-2-201ENST00000577708 61 ntBASIC17.05■□□□□ 0.32
KRT3P12035 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.05■□□□□ 0.32
KRT3P12035 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 MIR3687-1-201ENST00000614492 61 ntBASIC17.05■□□□□ 0.32
KRT3P12035 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KRT3P12035 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KRT3P12035 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
KRT3P12035 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT3P12035 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT3P12035 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT3P12035 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 BX842568.4-201ENST00000421222 227 ntBASIC17.04■□□□□ 0.32
KRT3P12035 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 AC112482.1-201ENST00000492080 688 ntBASIC17.04■□□□□ 0.32
KRT3P12035 YBX1P5-201ENST00000509441 847 ntBASIC17.04■□□□□ 0.32
KRT3P12035 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT3P12035 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 MIR4469-201ENST00000583919 79 ntBASIC17.04■□□□□ 0.32
KRT3P12035 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT3P12035 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT3P12035 AC105339.1-204ENST00000636249 355 ntBASIC17.04■□□□□ 0.32
KRT3P12035 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT3P12035 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT3P12035 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT3P12035 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT3P12035 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
KRT3P12035 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT3P12035 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
KRT3P12035 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 AC132872.4-202ENST00000622924 2756 ntBASIC17.03■□□□□ 0.32
KRT3P12035 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KRT3P12035 UXT-AS1-201ENST00000590504 1525 ntBASIC17.03■□□□□ 0.32
KRT3P12035 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT3P12035 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
KRT3P12035 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT3P12035 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT3P12035 AC061975.2-201ENST00000581722 295 ntBASIC17.03■□□□□ 0.32
KRT3P12035 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 AC010327.4-202ENST00000591484 748 ntBASIC17.03■□□□□ 0.32
KRT3P12035 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT3P12035 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms