Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MS4A1P11836 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A1P11836 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.78■□□□□ 0.92
MS4A1P11836 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MS4A1P11836 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MS4A1P11836 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A1P11836 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.78■□□□□ 0.92
MS4A1P11836 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 AC073389.1-201ENST00000595595 795 ntBASIC20.78■□□□□ 0.92
MS4A1P11836 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 AC099522.2-201ENST00000607001 744 ntBASIC20.78■□□□□ 0.92
MS4A1P11836 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A1P11836 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.78■□□□□ 0.92
MS4A1P11836 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A1P11836 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A1P11836 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A1P11836 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.77■□□□□ 0.92
MS4A1P11836 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MS4A1P11836 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.77■□□□□ 0.92
MS4A1P11836 FAM86C2P-203ENST00000528684 1004 ntBASIC20.77■□□□□ 0.92
MS4A1P11836 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.77■□□□□ 0.92
MS4A1P11836 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.77■□□□□ 0.92
MS4A1P11836 MIR4321-201ENST00000592276 80 ntBASIC20.77■□□□□ 0.92
MS4A1P11836 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A1P11836 AL136379.1-201ENST00000623471 2642 ntBASIC20.77■□□□□ 0.92
MS4A1P11836 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MS4A1P11836 FAM45BP-202ENST00000592932 1624 ntBASIC20.77■□□□□ 0.92
MS4A1P11836 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.77■□□□□ 0.92
MS4A1P11836 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MS4A1P11836 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
MS4A1P11836 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MS4A1P11836 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
MS4A1P11836 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
MS4A1P11836 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
MS4A1P11836 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 AC008677.1-201ENST00000519230 1561 ntBASIC20.76■□□□□ 0.91
MS4A1P11836 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.76■□□□□ 0.91
MS4A1P11836 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
MS4A1P11836 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
MS4A1P11836 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MS4A1P11836 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.76■□□□□ 0.91
MS4A1P11836 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.76■□□□□ 0.91
MS4A1P11836 AC040169.1-201ENST00000565382 521 ntBASIC20.76■□□□□ 0.91
MS4A1P11836 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MS4A1P11836 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms