Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AC092933.1-201ENST00000393644 945 ntBASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 EEF1DP4-201ENST00000446006 880 ntBASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AC124283.3-201ENST00000570869 594 ntBASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSB-PGBD3P0DP91 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 AC009053.2-201ENST00000563701 2365 ntBASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 RPL13AP25-201ENST00000484130 612 ntBASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.22■□□□□ 0.99
CSB-PGBD3P0DP91 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 C1QBPP1-201ENST00000400117 770 ntBASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 KRT18P64-201ENST00000434946 1219 ntBASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 FTH1P14-201ENST00000482930 551 ntBASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 PCDHB18P-201ENST00000524813 2368 ntBASIC21.21■□□□□ 0.99
CSB-PGBD3P0DP91 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 AL049840.4-201ENST00000602422 811 ntBASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms