Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CICP14-201ENST00000629111 2732 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 AC140658.5-201ENST00000438532 169 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 RNA5SP419-201ENST00000515908 135 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 AL078644.1-201ENST00000609881 752 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 AP005117.1-202ENST00000581724 1908 ntBASIC17.55■□□□□ 0.4
CCDC172P0C7W6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 DBET-201ENST00000630918 3363 ntBASIC17.54■□□□□ 0.4
CCDC172P0C7W6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 AC245100.5-201ENST00000452108 331 ntBASIC17.54■□□□□ 0.4
CCDC172P0C7W6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC172P0C7W6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.53■□□□□ 0.4
CCDC172P0C7W6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 AL161645.1-201ENST00000622716 1255 ntBASIC17.53■□□□□ 0.4
CCDC172P0C7W6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC172P0C7W6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms