Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 MIR943-201ENST00000401286 94 ntBASIC14.65□□□□□ -0.06
FREM3P0C091 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.65□□□□□ -0.06
FREM3P0C091 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
FREM3P0C091 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.65□□□□□ -0.06
FREM3P0C091 SPDYE12P-201ENST00000618416 771 ntBASIC14.65□□□□□ -0.06
FREM3P0C091 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.65□□□□□ -0.06
FREM3P0C091 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 AC006449.6-201ENST00000612330 2296 ntBASIC14.65□□□□□ -0.06
FREM3P0C091 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
FREM3P0C091 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.65□□□□□ -0.06
FREM3P0C091 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.65□□□□□ -0.06
FREM3P0C091 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.65□□□□□ -0.06
FREM3P0C091 AC105021.1-202ENST00000570572 669 ntBASIC14.65□□□□□ -0.06
FREM3P0C091 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.65□□□□□ -0.06
FREM3P0C091 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 AC046158.3-201ENST00000624947 2558 ntBASIC14.64□□□□□ -0.07
FREM3P0C091 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.64□□□□□ -0.07
FREM3P0C091 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.64□□□□□ -0.07
FREM3P0C091 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.64□□□□□ -0.07
FREM3P0C091 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.64□□□□□ -0.07
FREM3P0C091 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 AC004790.1-201ENST00000612686 536 ntBASIC14.64□□□□□ -0.07
FREM3P0C091 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FREM3P0C091 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.64□□□□□ -0.07
FREM3P0C091 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.64□□□□□ -0.07
FREM3P0C091 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FREM3P0C091 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.64□□□□□ -0.07
FREM3P0C091 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.63□□□□□ -0.07
FREM3P0C091 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.63□□□□□ -0.07
FREM3P0C091 AL844908.2-201ENST00000609461 460 ntBASIC14.63□□□□□ -0.07
FREM3P0C091 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.63□□□□□ -0.07
FREM3P0C091 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FREM3P0C091 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.63□□□□□ -0.07
FREM3P0C091 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.63□□□□□ -0.07
FREM3P0C091 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms