Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VTNP04004 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VTNP04004 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 AC098850.1-201ENST00000419919 790 ntBASIC17.61■□□□□ 0.41
VTNP04004 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 AC244107.1-201ENST00000442033 332 ntBASIC17.61■□□□□ 0.41
VTNP04004 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VTNP04004 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 TIMM17BP1-201ENST00000545713 516 ntBASIC17.61■□□□□ 0.41
VTNP04004 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VTNP04004 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.61■□□□□ 0.41
VTNP04004 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTNP04004 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.61■□□□□ 0.41
VTNP04004 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VTNP04004 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 AC006449.6-201ENST00000612330 2296 ntBASIC17.6■□□□□ 0.41
VTNP04004 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 AP006294.1-201ENST00000415407 339 ntBASIC17.6■□□□□ 0.41
VTNP04004 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VTNP04004 MYCLP2-201ENST00000449268 967 ntBASIC17.6■□□□□ 0.41
VTNP04004 INE1-201ENST00000456273 945 ntBASIC17.6■□□□□ 0.41
VTNP04004 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.6■□□□□ 0.41
VTNP04004 AC123567.1-201ENST00000548294 1261 ntBASIC17.6■□□□□ 0.41
VTNP04004 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.6■□□□□ 0.41
VTNP04004 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.6■□□□□ 0.41
VTNP04004 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.6■□□□□ 0.41
VTNP04004 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VTNP04004 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.6■□□□□ 0.41
VTNP04004 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.6■□□□□ 0.41
VTNP04004 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 Z97205.2-201ENST00000564697 1639 ntBASIC17.6■□□□□ 0.41
VTNP04004 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.6■□□□□ 0.41
VTNP04004 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
VTNP04004 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VTNP04004 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.6■□□□□ 0.41
VTNP04004 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTNP04004 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
VTNP04004 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 AC098614.1-201ENST00000368528 745 ntBASIC17.59■□□□□ 0.41
VTNP04004 HAUS4P1-201ENST00000406739 1145 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms