Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TOMM40O96008 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.72□□□□□ -0.37
TOMM40O96008 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 AP005117.1-202ENST00000581724 1908 ntBASIC12.72□□□□□ -0.37
TOMM40O96008 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.72□□□□□ -0.37
TOMM40O96008 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.72□□□□□ -0.37
TOMM40O96008 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.72□□□□□ -0.37
TOMM40O96008 AC092910.1-201ENST00000482027 1129 ntBASIC12.72□□□□□ -0.37
TOMM40O96008 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TOMM40O96008 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.72□□□□□ -0.37
TOMM40O96008 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TOMM40O96008 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.72□□□□□ -0.37
TOMM40O96008 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
TOMM40O96008 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TOMM40O96008 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
TOMM40O96008 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
TOMM40O96008 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.71□□□□□ -0.37
TOMM40O96008 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.71□□□□□ -0.37
TOMM40O96008 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TOMM40O96008 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TOMM40O96008 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
TOMM40O96008 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
TOMM40O96008 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TOMM40O96008 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TOMM40O96008 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.71□□□□□ -0.38
TOMM40O96008 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TOMM40O96008 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.71□□□□□ -0.38
TOMM40O96008 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TOMM40O96008 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms