Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.2■□□□□ 0.66
MBD4O95243 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD4O95243 FAM207CP-201ENST00000443486 507 ntBASIC19.2■□□□□ 0.66
MBD4O95243 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD4O95243 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD4O95243 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.2■□□□□ 0.66
MBD4O95243 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD4O95243 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.2■□□□□ 0.66
MBD4O95243 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD4O95243 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.2■□□□□ 0.66
MBD4O95243 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 AL109936.8-201ENST00000641772 604 ntBASIC19.2■□□□□ 0.66
MBD4O95243 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD4O95243 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD4O95243 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD4O95243 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MBD4O95243 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
MBD4O95243 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD4O95243 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.19■□□□□ 0.66
MBD4O95243 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.19■□□□□ 0.66
MBD4O95243 SPDYE18-201ENST00000510091 1050 ntBASIC19.19■□□□□ 0.66
MBD4O95243 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.19■□□□□ 0.66
MBD4O95243 AC135586.1-201ENST00000539323 574 ntBASIC19.19■□□□□ 0.66
MBD4O95243 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 AC004790.1-201ENST00000612686 536 ntBASIC19.19■□□□□ 0.66
MBD4O95243 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD4O95243 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MBD4O95243 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD4O95243 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD4O95243 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD4O95243 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 CYP2T1P-202ENST00000641596 2535 ntBASIC19.18■□□□□ 0.66
MBD4O95243 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD4O95243 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 FO393414.2-201ENST00000405153 598 ntBASIC19.18■□□□□ 0.66
MBD4O95243 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD4O95243 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MBD4O95243 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD4O95243 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MBD4O95243 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms