Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKL5O76039 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDKL5O76039 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL5O76039 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CDKL5O76039 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CDKL5O76039 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CDKL5O76039 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL5O76039 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL5O76039 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.78■□□□□ 0.6
CDKL5O76039 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.78■□□□□ 0.6
CDKL5O76039 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 AC112482.1-201ENST00000492080 688 ntBASIC18.78■□□□□ 0.6
CDKL5O76039 AP000344.2-201ENST00000512987 629 ntBASIC18.78■□□□□ 0.6
CDKL5O76039 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.78■□□□□ 0.6
CDKL5O76039 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL5O76039 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.78■□□□□ 0.6
CDKL5O76039 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL5O76039 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDKL5O76039 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CDKL5O76039 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL5O76039 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.77■□□□□ 0.6
CDKL5O76039 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL5O76039 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKL5O76039 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CDKL5O76039 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CDKL5O76039 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL5O76039 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDKL5O76039 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CDKL5O76039 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.77■□□□□ 0.59
CDKL5O76039 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL5O76039 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL5O76039 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CDKL5O76039 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL5O76039 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKL5O76039 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL5O76039 KRT18P32-201ENST00000424695 1287 ntBASIC18.76■□□□□ 0.59
CDKL5O76039 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKL5O76039 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL5O76039 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.76■□□□□ 0.59
CDKL5O76039 RARRES2P9-201ENST00000565168 469 ntBASIC18.76■□□□□ 0.59
CDKL5O76039 AC004835.2-201ENST00000603762 682 ntBASIC18.76■□□□□ 0.59
CDKL5O76039 AC026979.3-201ENST00000607315 403 ntBASIC18.76■□□□□ 0.59
CDKL5O76039 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL5O76039 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms