Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.47■□□□□ 0.07
GFRA3O60609 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 CEP164P1-201ENST00000455142 418 ntBASIC15.47■□□□□ 0.07
GFRA3O60609 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.47■□□□□ 0.07
GFRA3O60609 ALG1L13P-202ENST00000519320 584 ntBASIC15.47■□□□□ 0.07
GFRA3O60609 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.47■□□□□ 0.07
GFRA3O60609 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.47■□□□□ 0.07
GFRA3O60609 AC012044.1-201ENST00000603431 297 ntBASIC15.47■□□□□ 0.07
GFRA3O60609 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.47■□□□□ 0.07
GFRA3O60609 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.47■□□□□ 0.07
GFRA3O60609 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.47■□□□□ 0.07
GFRA3O60609 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GFRA3O60609 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.47■□□□□ 0.07
GFRA3O60609 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
GFRA3O60609 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
GFRA3O60609 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
GFRA3O60609 AC093525.9-201ENST00000624961 1746 ntBASIC15.46■□□□□ 0.07
GFRA3O60609 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
GFRA3O60609 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.46■□□□□ 0.07
GFRA3O60609 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.46■□□□□ 0.07
GFRA3O60609 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.46■□□□□ 0.07
GFRA3O60609 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.46■□□□□ 0.07
GFRA3O60609 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.46■□□□□ 0.07
GFRA3O60609 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC15.46■□□□□ 0.07
GFRA3O60609 AC138466.4-201ENST00000623965 852 ntBASIC15.46■□□□□ 0.07
GFRA3O60609 AC127024.7-201ENST00000625101 200 ntBASIC15.46■□□□□ 0.07
GFRA3O60609 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
GFRA3O60609 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.46■□□□□ 0.07
GFRA3O60609 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GFRA3O60609 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.46■□□□□ 0.06
GFRA3O60609 AC006277.1-201ENST00000624348 1610 ntBASIC15.46■□□□□ 0.06
GFRA3O60609 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GFRA3O60609 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.46■□□□□ 0.06
GFRA3O60609 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GFRA3O60609 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
GFRA3O60609 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 AL603841.1-201ENST00000430516 664 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.45■□□□□ 0.06
GFRA3O60609 TARDBPP1-201ENST00000442013 1203 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 AC006335.1-201ENST00000445200 547 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 AC106794.1-201ENST00000506935 792 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.45■□□□□ 0.06
GFRA3O60609 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.45■□□□□ 0.06
GFRA3O60609 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 RN7SL596P-201ENST00000582123 288 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 AC093813.1-201ENST00000605066 256 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 AP005019.2-201ENST00000615104 511 ntBASIC15.45■□□□□ 0.06
GFRA3O60609 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
GFRA3O60609 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GFRA3O60609 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GFRA3O60609 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GFRA3O60609 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms