Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 MIR600HG-201ENST00000449175 5984 ntBASIC14.39□□□□□ -0.11
GMDSO60547 GGT3P-204ENST00000453783 1664 ntBASIC14.39□□□□□ -0.11
GMDSO60547 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GMDSO60547 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GMDSO60547 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GMDSO60547 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 PPT1-215ENST00000641471 2368 ntBASIC14.38□□□□□ -0.11
GMDSO60547 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 PMS2P1-201ENST00000431037 1228 ntBASIC14.38□□□□□ -0.11
GMDSO60547 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.38□□□□□ -0.11
GMDSO60547 AC009947.1-201ENST00000444350 727 ntBASIC14.38□□□□□ -0.11
GMDSO60547 AC107918.2-201ENST00000530817 355 ntBASIC14.38□□□□□ -0.11
GMDSO60547 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.38□□□□□ -0.11
GMDSO60547 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.38□□□□□ -0.11
GMDSO60547 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 SLC22A20-204ENST00000530038 1673 ntBASIC14.38□□□□□ -0.11
GMDSO60547 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GMDSO60547 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
GMDSO60547 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GMDSO60547 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GMDSO60547 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GMDSO60547 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
GMDSO60547 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
GMDSO60547 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GMDSO60547 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.37□□□□□ -0.11
GMDSO60547 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 VN2R19P-201ENST00000442399 1052 ntBASIC14.37□□□□□ -0.11
GMDSO60547 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.37□□□□□ -0.11
GMDSO60547 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 AC145285.3-201ENST00000564603 959 ntBASIC14.37□□□□□ -0.11
GMDSO60547 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.37□□□□□ -0.11
GMDSO60547 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
GMDSO60547 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.37□□□□□ -0.11
GMDSO60547 Z83851.2-201ENST00000609564 659 ntBASIC14.37□□□□□ -0.11
GMDSO60547 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GMDSO60547 AL031731.1-201ENST00000642131 2094 ntBASIC14.37□□□□□ -0.11
GMDSO60547 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GMDSO60547 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.37□□□□□ -0.11
GMDSO60547 PRAL-201ENST00000624952 3286 ntBASIC14.37□□□□□ -0.11
GMDSO60547 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.37□□□□□ -0.11
GMDSO60547 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms