Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 MIR1909-201ENST00000411312 80 ntBASIC20.52■□□□□ 0.88
KCNQ3O43525 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNQ3O43525 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNQ3O43525 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNQ3O43525 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 AC119751.2-201ENST00000504529 210 ntBASIC20.52■□□□□ 0.88
KCNQ3O43525 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNQ3O43525 SNX29P1-201ENST00000548357 1007 ntBASIC20.52■□□□□ 0.88
KCNQ3O43525 AL512343.1-201ENST00000605837 169 ntBASIC20.52■□□□□ 0.88
KCNQ3O43525 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KCNQ3O43525 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNQ3O43525 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
KCNQ3O43525 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNQ3O43525 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNQ3O43525 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.52■□□□□ 0.87
KCNQ3O43525 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ3O43525 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNQ3O43525 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.52■□□□□ 0.87
KCNQ3O43525 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 AP001282.1-201ENST00000531301 1499 ntBASIC20.51■□□□□ 0.87
KCNQ3O43525 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNQ3O43525 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KCNQ3O43525 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KCNQ3O43525 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNQ3O43525 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNQ3O43525 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KCNQ3O43525 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KCNQ3O43525 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
KCNQ3O43525 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KCNQ3O43525 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 AC136604.1-201ENST00000418535 575 ntBASIC20.5■□□□□ 0.87
KCNQ3O43525 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.5■□□□□ 0.87
KCNQ3O43525 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 AC022210.1-201ENST00000449856 793 ntBASIC20.5■□□□□ 0.87
KCNQ3O43525 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.5■□□□□ 0.87
KCNQ3O43525 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.5■□□□□ 0.87
KCNQ3O43525 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.5■□□□□ 0.87
KCNQ3O43525 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNQ3O43525 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KCNQ3O43525 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KCNQ3O43525 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KCNQ3O43525 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNQ3O43525 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
KCNQ3O43525 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 AC018695.7-201ENST00000624587 2492 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms