Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.05□□□□□ -0.16
PHF1O43189 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 BASP1P1-201ENST00000430708 665 ntBASIC14.05□□□□□ -0.16
PHF1O43189 AC002472.2-201ENST00000442739 958 ntBASIC14.05□□□□□ -0.16
PHF1O43189 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.05□□□□□ -0.16
PHF1O43189 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
PHF1O43189 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 AC022145.2-201ENST00000598203 171 ntBASIC14.05□□□□□ -0.16
PHF1O43189 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.05□□□□□ -0.16
PHF1O43189 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.05□□□□□ -0.16
PHF1O43189 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.05□□□□□ -0.16
PHF1O43189 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 AL365203.3-201ENST00000609742 2057 ntBASIC14.05□□□□□ -0.16
PHF1O43189 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.05□□□□□ -0.16
PHF1O43189 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHF1O43189 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 AC068418.2-201ENST00000577309 3703 ntBASIC14.04□□□□□ -0.16
PHF1O43189 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.04□□□□□ -0.16
PHF1O43189 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.04□□□□□ -0.16
PHF1O43189 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.04□□□□□ -0.16
PHF1O43189 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.04□□□□□ -0.16
PHF1O43189 AC068137.2-201ENST00000605408 478 ntBASIC14.04□□□□□ -0.16
PHF1O43189 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 REXO1L3P-201ENST00000622202 1288 ntBASIC14.04□□□□□ -0.16
PHF1O43189 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.04□□□□□ -0.16
PHF1O43189 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 AL365209.1-201ENST00000624418 6473 ntBASIC14.04□□□□□ -0.16
PHF1O43189 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.04□□□□□ -0.16
PHF1O43189 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHF1O43189 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms