Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXN1O15353 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXN1O15353 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.23■□□□□ 0.67
FOXN1O15353 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXN1O15353 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 AL603756.1-201ENST00000606511 2163 ntBASIC19.22■□□□□ 0.67
FOXN1O15353 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXN1O15353 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 RPS2P36-201ENST00000456516 831 ntBASIC19.22■□□□□ 0.67
FOXN1O15353 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
FOXN1O15353 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
FOXN1O15353 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXN1O15353 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXN1O15353 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXN1O15353 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXN1O15353 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXN1O15353 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXN1O15353 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXN1O15353 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXN1O15353 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
FOXN1O15353 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXN1O15353 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
FOXN1O15353 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 AC104457.1-201ENST00000401024 814 ntBASIC19.21■□□□□ 0.67
FOXN1O15353 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXN1O15353 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXN1O15353 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXN1O15353 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXN1O15353 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXN1O15353 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXN1O15353 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 AC004461.2-201ENST00000629517 803 ntBASIC19.21■□□□□ 0.67
FOXN1O15353 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 AL353732.1-201ENST00000569618 1459 ntBASIC19.21■□□□□ 0.67
FOXN1O15353 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXN1O15353 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
FOXN1O15353 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
FOXN1O15353 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXN1O15353 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXN1O15353 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXN1O15353 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms