Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CASQ2O14958 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CASQ2O14958 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 AC005336.2-201ENST00000593183 939 ntBASIC15.41■□□□□ 0.06
CASQ2O14958 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.41■□□□□ 0.06
CASQ2O14958 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.41■□□□□ 0.06
CASQ2O14958 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CASQ2O14958 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASQ2O14958 AC105250.1-201ENST00000509378 2057 ntBASIC15.4■□□□□ 0.06
CASQ2O14958 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 AC243591.1-201ENST00000452967 1364 ntBASIC15.4■□□□□ 0.06
CASQ2O14958 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CASQ2O14958 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 HBZP1-201ENST00000354915 429 ntBASIC15.4■□□□□ 0.06
CASQ2O14958 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 FAM8A6P-201ENST00000407496 1135 ntBASIC15.4■□□□□ 0.06
CASQ2O14958 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 AC073592.5-201ENST00000624854 528 ntBASIC15.4■□□□□ 0.06
CASQ2O14958 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASQ2O14958 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.4■□□□□ 0.06
CASQ2O14958 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CASQ2O14958 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.39■□□□□ 0.05
CASQ2O14958 AGAP7P-201ENST00000582299 2062 ntBASIC15.39■□□□□ 0.05
CASQ2O14958 AGAP14-201ENST00000624701 2060 ntBASIC15.39■□□□□ 0.05
CASQ2O14958 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CASQ2O14958 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CASQ2O14958 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
CASQ2O14958 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.39■□□□□ 0.05
CASQ2O14958 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.39■□□□□ 0.05
CASQ2O14958 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.39■□□□□ 0.05
CASQ2O14958 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.39■□□□□ 0.05
CASQ2O14958 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASQ2O14958 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms