Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.93■■□□□ 1.1
CHD2O14647 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHD2O14647 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.92■■□□□ 1.1
CHD2O14647 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD2O14647 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD2O14647 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 AC134698.3-201ENST00000523880 214 ntBASIC21.92■■□□□ 1.1
CHD2O14647 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CHD2O14647 AC013355.1-201ENST00000562625 723 ntBASIC21.92■■□□□ 1.1
CHD2O14647 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD2O14647 AP000346.4-201ENST00000614827 381 ntBASIC21.92■■□□□ 1.1
CHD2O14647 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD2O14647 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD2O14647 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD2O14647 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD2O14647 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 MIR3907-201ENST00000579424 151 ntBASIC21.92■■□□□ 1.1
CHD2O14647 AP003419.4-201ENST00000616071 517 ntBASIC21.92■■□□□ 1.1
CHD2O14647 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHD2O14647 AC008132.1-202ENST00000342005 1389 ntBASIC21.92■■□□□ 1.1
CHD2O14647 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD2O14647 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CHD2O14647 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CHD2O14647 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD2O14647 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD2O14647 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CHD2O14647 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.91■■□□□ 1.1
CHD2O14647 AF254983.2-201ENST00000612331 135 ntBASIC21.91■■□□□ 1.1
CHD2O14647 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.91■■□□□ 1.1
CHD2O14647 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD2O14647 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CHD2O14647 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CHD2O14647 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CHD2O14647 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CHD2O14647 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHD2O14647 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 KLF2P2-201ENST00000416807 1039 ntBASIC21.9■■□□□ 1.1
CHD2O14647 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD2O14647 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD2O14647 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD2O14647 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.9■■□□□ 1.1
CHD2O14647 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD2O14647 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CHD2O14647 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD2O14647 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CHD2O14647 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD2O14647 NUP210P1-202ENST00000504322 710 ntBASIC21.9■■□□□ 1.1
CHD2O14647 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD2O14647 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHD2O14647 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.89■■□□□ 1.09
CHD2O14647 AC148477.4-201ENST00000613430 1793 ntBASIC21.89■■□□□ 1.09
CHD2O14647 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD2O14647 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD2O14647 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CHD2O14647 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms