Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AL603756.1-201ENST00000606511 2163 ntBASIC16■□□□□ 0.15
TLR4O00206 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16■□□□□ 0.15
TLR4O00206 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TLR4O00206 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TLR4O00206 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TLR4O00206 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TLR4O00206 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16■□□□□ 0.15
TLR4O00206 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 AP006294.1-201ENST00000415407 339 ntBASIC15.99■□□□□ 0.15
TLR4O00206 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.99■□□□□ 0.15
TLR4O00206 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.99■□□□□ 0.15
TLR4O00206 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.99■□□□□ 0.15
TLR4O00206 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.99■□□□□ 0.15
TLR4O00206 CHCHD2P3-201ENST00000603038 451 ntBASIC15.99■□□□□ 0.15
TLR4O00206 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TLR4O00206 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 DOC2GP-204ENST00000639052 2548 ntBASIC15.99■□□□□ 0.15
TLR4O00206 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.99■□□□□ 0.15
TLR4O00206 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TLR4O00206 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TLR4O00206 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TLR4O00206 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TLR4O00206 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.98■□□□□ 0.15
TLR4O00206 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.98■□□□□ 0.15
TLR4O00206 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 RN7SL752P-201ENST00000463779 287 ntBASIC15.98■□□□□ 0.15
TLR4O00206 SPDYE18-201ENST00000510091 1050 ntBASIC15.98■□□□□ 0.15
TLR4O00206 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
TLR4O00206 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.98■□□□□ 0.15
TLR4O00206 SRD5A3P1-201ENST00000603021 949 ntBASIC15.98■□□□□ 0.15
TLR4O00206 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 AC004790.1-201ENST00000612686 536 ntBASIC15.98■□□□□ 0.15
TLR4O00206 PCGF3-213ENST00000620529 1899 ntBASIC15.98■□□□□ 0.15
TLR4O00206 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TLR4O00206 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TLR4O00206 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.98■□□□□ 0.15
TLR4O00206 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TLR4O00206 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms