Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 AC025048.3-201ENST00000590609 569 ntBASIC12.95□□□□□ -0.34
ODF3BA8MYP8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 AL096865.1-201ENST00000606796 927 ntBASIC12.95□□□□□ -0.34
ODF3BA8MYP8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 AC005702.4-201ENST00000618393 416 ntBASIC12.95□□□□□ -0.34
ODF3BA8MYP8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ODF3BA8MYP8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 BTBD7P1-201ENST00000447253 1453 ntBASIC12.94□□□□□ -0.34
ODF3BA8MYP8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 MRPS18AP1-201ENST00000414458 589 ntBASIC12.94□□□□□ -0.34
ODF3BA8MYP8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 SDHAP3-202ENST00000515467 728 ntBASIC12.94□□□□□ -0.34
ODF3BA8MYP8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 HNRNPUP1-201ENST00000554987 333 ntBASIC12.94□□□□□ -0.34
ODF3BA8MYP8 AC009407.1-201ENST00000568958 598 ntBASIC12.94□□□□□ -0.34
ODF3BA8MYP8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ODF3BA8MYP8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AC136604.1-201ENST00000418535 575 ntBASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.93□□□□□ -0.34
ODF3BA8MYP8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.93□□□□□ -0.34
ODF3BA8MYP8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms