Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 AC020658.6-201ENST00000623564 1870 ntBASIC16.81■□□□□ 0.28
SRRM3A6NNA2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 AC023908.3-201ENST00000564211 3047 ntBASIC16.81■□□□□ 0.28
SRRM3A6NNA2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRRM3A6NNA2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 MTCL1P1-201ENST00000446207 792 ntBASIC16.8■□□□□ 0.28
SRRM3A6NNA2 HCG4B-203ENST00000450128 991 ntBASIC16.8■□□□□ 0.28
SRRM3A6NNA2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PDPK2P-202ENST00000562415 1191 ntBASIC16.8■□□□□ 0.28
SRRM3A6NNA2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM3A6NNA2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 STK25P1-201ENST00000585406 838 ntBASIC16.79■□□□□ 0.28
SRRM3A6NNA2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.79■□□□□ 0.28
SRRM3A6NNA2 AL513210.1-201ENST00000629608 234 ntBASIC16.79■□□□□ 0.28
SRRM3A6NNA2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CICP24-201ENST00000605464 2705 ntBASIC16.79■□□□□ 0.28
SRRM3A6NNA2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM3A6NNA2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.78■□□□□ 0.28
SRRM3A6NNA2 AL021920.2-201ENST00000624828 1351 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms