Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AL627389.1-201ENST00000413508 1182 ntBASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AL161670.2-201ENST00000557650 1227 ntBASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 PCGF3-213ENST00000620529 1899 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 TPM3P8-201ENST00000330554 643 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 AC011742.3-201ENST00000439053 820 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 RN7SL8P-201ENST00000461771 266 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 AC005740.2-201ENST00000511085 419 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 AF254983.2-201ENST00000612331 135 ntBASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM88BA6NKF7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AC092068.3-201ENST00000587894 2016 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 ACTG1P2-201ENST00000415776 1125 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 ACTG1P11-201ENST00000425411 1125 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 NOC2LP1-201ENST00000450578 752 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AC125604.1-201ENST00000496255 707 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AC009084.3-201ENST00000623356 437 ntBASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TMEM88BA6NKF7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms