Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 AC006001.1-201ENST00000325130 474 ntBASIC21.56■■□□□ 1.04
SBNO1A3KN83 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 HNRNPUP1-201ENST00000554987 333 ntBASIC21.56■■□□□ 1.04
SBNO1A3KN83 COG4-212ENST00000564653 590 ntTSL 5 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 AL021578.1-201ENST00000613646 709 ntBASIC21.56■■□□□ 1.04
SBNO1A3KN83 AL008638.5-201ENST00000623814 1298 ntBASIC21.56■■□□□ 1.04
SBNO1A3KN83 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SBNO1A3KN83 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
SBNO1A3KN83 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 SLC25A24P2-201ENST00000415059 510 ntBASIC21.55■■□□□ 1.04
SBNO1A3KN83 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.55■■□□□ 1.04
SBNO1A3KN83 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SBNO1A3KN83 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SBNO1A3KN83 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 Z93015.1-201ENST00000451718 390 ntBASIC21.54■■□□□ 1.04
SBNO1A3KN83 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.54■■□□□ 1.04
SBNO1A3KN83 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms