Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 AL591684.3-201ENST00000605187 298 ntBASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 AC005332.1-201ENST00000577698 1310 ntBASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV3S1A0A5B6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
TCRBV3S1A0A5B6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AP001282.1-201ENST00000531301 1499 ntBASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AJ011931.1-201ENST00000618749 2492 ntBASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AC093724.1-201ENST00000448659 1027 ntBASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV3S1A0A5B6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 AC139749.1-202ENST00000617529 3139 ntBASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 WASH6P-202ENST00000359512 1437 ntBASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 AC104819.1-201ENST00000504587 486 ntBASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV3S1A0A5B6 AL121956.5-201ENST00000625261 221 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms