Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC011477.6-201ENST00000604980 1927 ntBASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC196A0A1B0GTZ2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC022188.1-201ENST00000620960 1664 ntBASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC004987.2-201ENST00000395959 1148 ntBASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 HLA-J-203ENST00000494367 1087 ntBASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 AP001160.2-201ENST00000596071 487 ntBASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC196A0A1B0GTZ2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC196A0A1B0GTZ2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC196A0A1B0GTZ2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms