Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PRSS29P-201ENST00000440800 595 ntBASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 FAM197Y8-203ENST00000450145 560 ntBASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC012640.2-201ENST00000561606 901 ntBASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-7A0A0A0MS04 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 CICP23-201ENST00000605013 2741 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AF186996.4-201ENST00000467186 377 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL031432.2-201ENST00000566714 459 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL928711.1-201ENST00000570165 459 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC012313.10-201ENST00000623509 926 ntBASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV6-7A0A0A0MS04 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AP002414.2-201ENST00000591780 3365 ntBASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 KRT18P67-201ENST00000432816 1264 ntBASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms