Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 KRT19P2-202ENST00000557173 1012 ntBASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC004877.2-201ENST00000623941 599 ntBASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC091951.1-201ENST00000512854 2465 ntBASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-3A0A0A0MS03 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 FAAHP1-202ENST00000446499 1238 ntBASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 Z83851.2-201ENST00000609564 659 ntBASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 BCAR1-209ENST00000546196 1340 ntBASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-3A0A0A0MS03 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC243562.2-201ENST00000561247 970 ntBASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AL138918.1-201ENST00000568306 659 ntBASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 AL161645.1-201ENST00000622716 1255 ntBASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 TSPY26P-202ENST00000565928 3884 ntBASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV5-3A0A0A0MS03 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms