Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 AC133539.2-201ENST00000604757 467 ntBASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 AC133552.6-201ENST00000613406 534 ntBASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 EEF1DP4-201ENST00000446006 880 ntBASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 BTNL10-201ENST00000595971 695 ntBASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 KRT8P22-201ENST00000562317 1415 ntBASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB7Q9Y5E2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 BOLA2P3-201ENST00000404566 256 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 KRT43P-201ENST00000434019 910 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 RPL13P2-201ENST00000440687 659 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms