Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR1DQ9Y2S0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AC007967.2-201ENST00000432613 625 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 KRT18P34-201ENST00000488218 1270 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AC018845.2-201ENST00000568326 409 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 U82695.1-201ENST00000635752 1889 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 PAUPAR-201ENST00000630360 2965 ntBASIC14.52□□□□□ -0.09
POLR1DQ9Y2S0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR1DQ9Y2S0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR1DQ9Y2S0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms