Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 KRT18P34-201ENST00000488218 1270 ntBASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.83■□□□□ 0.93
PDZRN3Q9UPQ7 OR6D1P-203ENST00000641209 4860 ntBASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 PAUPAR-201ENST00000630360 2965 ntBASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDZRN3Q9UPQ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 AC131009.4-201ENST00000624048 1740 ntBASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 U91328.1-201ENST00000437528 223 ntBASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 AL596087.1-201ENST00000400979 1969 ntBASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZRN3Q9UPQ7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 HLA-H-201ENST00000383620 1096 ntBASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.81■□□□□ 0.92
PDZRN3Q9UPQ7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms