Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 SNX33P1-201ENST00000592116 1762 ntBASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 HLA-H-201ENST00000383620 1096 ntBASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AL662844.4-201ENST00000606367 2838 ntBASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AC126755.1-201ENST00000525846 6405 ntBASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA1Q9UND3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AC100757.3-201ENST00000622361 1406 ntBASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AL590560.3-201ENST00000623350 461 ntBASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 GGT3P-204ENST00000453783 1664 ntBASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA1Q9UND3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms