Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AP001258.2-201ENST00000529891 490 ntBASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 AC000095.1-201ENST00000603208 874 ntBASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNRF3Q9ULT6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNRF3Q9ULT6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AC005332.8-201ENST00000622750 2735 ntBASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AC136604.1-201ENST00000418535 575 ntBASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AC026410.3-201ENST00000514280 936 ntBASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNRF3Q9ULT6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 AL607033.1-201ENST00000623900 1599 ntBASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 CALR4P-201ENST00000431943 946 ntBASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 AC025279.2-201ENST00000569730 653 ntBASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNRF3Q9ULT6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.14■□□□□ 0.66
ZNRF3Q9ULT6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNRF3Q9ULT6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNRF3Q9ULT6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNRF3Q9ULT6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNRF3Q9ULT6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms