Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.84□□□□□ -0.03
LRFN1Q9P244 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 AC027307.3-201ENST00000594262 1100 ntBASIC14.84□□□□□ -0.03
LRFN1Q9P244 AC008738.7-201ENST00000609744 511 ntBASIC14.84□□□□□ -0.03
LRFN1Q9P244 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRFN1Q9P244 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LRFN1Q9P244 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRFN1Q9P244 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRFN1Q9P244 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRFN1Q9P244 BTBD7P1-201ENST00000447253 1453 ntBASIC14.83□□□□□ -0.03
LRFN1Q9P244 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.83□□□□□ -0.03
LRFN1Q9P244 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.83□□□□□ -0.03
LRFN1Q9P244 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 AC022211.2-201ENST00000585075 2527 ntBASIC14.83□□□□□ -0.04
LRFN1Q9P244 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 AC135586.1-201ENST00000539323 574 ntBASIC14.83□□□□□ -0.04
LRFN1Q9P244 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRFN1Q9P244 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.83□□□□□ -0.04
LRFN1Q9P244 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.82□□□□□ -0.04
LRFN1Q9P244 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRFN1Q9P244 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms