Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRMT13Q9NUP7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 AL133338.1-201ENST00000565695 1517 ntBASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRMT13Q9NUP7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 AL592424.1-201ENST00000563624 1536 ntBASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRMT13Q9NUP7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AP001094.4-201ENST00000579008 2176 ntBASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRMT13Q9NUP7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TRMT13Q9NUP7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRMT13Q9NUP7 KRT8P44-201ENST00000441609 1350 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms