Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 AC126755.1-201ENST00000525846 6405 ntBASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOMER3Q9NSC5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 AC018712.1-201ENST00000455767 687 ntBASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.91■□□□□ 0.3
HOMER3Q9NSC5 PRAL-201ENST00000624952 3286 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AC093724.1-201ENST00000448659 1027 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 FAM197Y8-203ENST00000450145 560 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AL513480.1-201ENST00000451731 511 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AP002469.2-201ENST00000531724 424 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 AP002414.3-201ENST00000589352 1468 ntBASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOMER3Q9NSC5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOMER3Q9NSC5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HOMER3Q9NSC5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.89■□□□□ 0.29
HOMER3Q9NSC5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms