Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 AC005498.2-205ENST00000593218 784 ntBASIC17.11■□□□□ 0.33
CYLDQ9NQC7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.11■□□□□ 0.33
CYLDQ9NQC7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AL365203.3-201ENST00000609742 2057 ntBASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.1■□□□□ 0.33
CYLDQ9NQC7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 MIR4453-201ENST00000584019 89 ntBASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AL390955.2-201ENST00000603032 514 ntBASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC007967.4-201ENST00000614700 386 ntBASIC17.1■□□□□ 0.33
CYLDQ9NQC7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
CYLDQ9NQC7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 HAUS4P1-201ENST00000406739 1145 ntBASIC17.09■□□□□ 0.33
CYLDQ9NQC7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CYLDQ9NQC7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms