Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC138932.2-201ENST00000548268 1459 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC126755.4-201ENST00000549796 1459 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC018695.7-201ENST00000624587 2492 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 GK-202ENST00000378941 458 ntTSL 3 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC025048.3-201ENST00000590609 569 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC099568.2-201ENST00000609194 695 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC005702.4-201ENST00000618393 416 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 FLJ38576-201ENST00000623820 2459 ntBASIC18.77■□□□□ 0.6
SH2D4AQ9H788 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AP006294.1-201ENST00000415407 339 ntBASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 TIMM17BP1-201ENST00000545713 516 ntBASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC092337.1-201ENST00000568699 1129 ntBASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH2D4AQ9H788 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH2D4AQ9H788 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH2D4AQ9H788 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SH2D4AQ9H788 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH2D4AQ9H788 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH2D4AQ9H788 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 AL691432.1-201ENST00000596308 1422 ntBASIC18.76■□□□□ 0.59
SH2D4AQ9H788 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.76■□□□□ 0.59
SH2D4AQ9H788 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms