Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AL356488.3-201ENST00000608574 2888 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 LINC01144-201ENST00000626198 1710 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC139749.1-202ENST00000617529 3139 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TSPY14P-201ENST00000303979 915 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC003669.1-201ENST00000334569 611 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MIR648-201ENST00000385046 94 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 IGHGP-201ENST00000390555 1178 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FAM220CP-201ENST00000395253 831 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 APTR-205ENST00000447009 902 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FITM1-202ENST00000559294 800 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ZNF444P1-201ENST00000559497 298 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AP003071.4-201ENST00000562276 1284 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC026471.5-201ENST00000615068 467 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms