Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AL603832.2-201ENST00000566195 2125 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 RPL37AP1-201ENST00000412502 279 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 NME2P1-201ENST00000426182 414 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 RN7SL828P-201ENST00000607615 303 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AC105021.1-202ENST00000570572 669 ntBASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AL132655.2-201ENST00000596276 594 ntBASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AL589739.1-201ENST00000607720 493 ntBASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 AC004840.1-201ENST00000636359 365 ntBASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.56■□□□□ 0.72
RPAP1Q9BWH6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 U82695.1-201ENST00000635752 1889 ntBASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 PAUPAR-201ENST00000630360 2965 ntBASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AL592424.1-201ENST00000563624 1536 ntBASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.55■□□□□ 0.72
RPAP1Q9BWH6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPAP1Q9BWH6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms