Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.34□□□□□ -0.43
VGLL1Q99990 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 DUSP5P1-201ENST00000441325 1139 ntBASIC12.34□□□□□ -0.43
VGLL1Q99990 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.34□□□□□ -0.43
VGLL1Q99990 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.34□□□□□ -0.43
VGLL1Q99990 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.34□□□□□ -0.43
VGLL1Q99990 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
VGLL1Q99990 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
VGLL1Q99990 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
VGLL1Q99990 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
VGLL1Q99990 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VGLL1Q99990 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VGLL1Q99990 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 AC013268.4-201ENST00000637413 2228 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 AKR1C7P-201ENST00000305623 895 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 KRT18P27-201ENST00000427733 1299 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 RPS2P1-201ENST00000434010 821 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 SAPCD2P3-201ENST00000455031 850 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 AC136632.2-201ENST00000512891 861 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 AF238378.1-201ENST00000526806 358 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 PRELID1P1-202ENST00000567272 903 ntBASIC12.33□□□□□ -0.44
VGLL1Q99990 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.33□□□□□ -0.44
VGLL1Q99990 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VGLL1Q99990 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.33□□□□□ -0.44
VGLL1Q99990 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VGLL1Q99990 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VGLL1Q99990 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.33□□□□□ -0.44
VGLL1Q99990 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VGLL1Q99990 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VGLL1Q99990 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.32□□□□□ -0.44
VGLL1Q99990 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms