Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 LINC01115-203ENST00000606068 577 ntBASIC18.74■□□□□ 0.59
CCDC17Q96LX7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC17Q96LX7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 MYCLP2-201ENST00000449268 967 ntBASIC18.73■□□□□ 0.59
CCDC17Q96LX7 KRT17P7-201ENST00000451704 1104 ntBASIC18.73■□□□□ 0.59
CCDC17Q96LX7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 AC123567.1-201ENST00000548294 1261 ntBASIC18.73■□□□□ 0.59
CCDC17Q96LX7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 REXO1L1P-202ENST00000608646 1974 ntBASIC18.73■□□□□ 0.59
CCDC17Q96LX7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC17Q96LX7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 AC074338.1-201ENST00000416825 156 ntBASIC18.72■□□□□ 0.59
CCDC17Q96LX7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 AC011495.1-201ENST00000498085 584 ntBASIC18.72■□□□□ 0.59
CCDC17Q96LX7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 AL450472.2-201ENST00000603663 1156 ntBASIC18.72■□□□□ 0.59
CCDC17Q96LX7 AL391069.4-201ENST00000609583 481 ntBASIC18.72■□□□□ 0.59
CCDC17Q96LX7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC17Q96LX7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 AC136604.1-201ENST00000418535 575 ntBASIC18.71■□□□□ 0.59
CCDC17Q96LX7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 WASH4P-201ENST00000564273 1246 ntBASIC18.71■□□□□ 0.59
CCDC17Q96LX7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TMEM261P1-201ENST00000604899 340 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms