Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SUSD3Q96L08 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SUSD3Q96L08 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17■□□□□ 0.31
SUSD3Q96L08 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17■□□□□ 0.31
SUSD3Q96L08 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 AP006294.1-201ENST00000415407 339 ntBASIC17■□□□□ 0.31
SUSD3Q96L08 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17■□□□□ 0.31
SUSD3Q96L08 NME4-207ENST00000450036 985 ntTSL 3 BASIC17■□□□□ 0.31
SUSD3Q96L08 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17■□□□□ 0.31
SUSD3Q96L08 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17■□□□□ 0.31
SUSD3Q96L08 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17■□□□□ 0.31
SUSD3Q96L08 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 AC123567.1-201ENST00000548294 1261 ntBASIC17■□□□□ 0.31
SUSD3Q96L08 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17■□□□□ 0.31
SUSD3Q96L08 AL391069.4-201ENST00000609583 481 ntBASIC17■□□□□ 0.31
SUSD3Q96L08 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17■□□□□ 0.31
SUSD3Q96L08 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 PCDHA14-201ENST00000506751 2298 ntBASIC17■□□□□ 0.31
SUSD3Q96L08 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17■□□□□ 0.31
SUSD3Q96L08 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17■□□□□ 0.31
SUSD3Q96L08 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SUSD3Q96L08 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 MYCLP2-201ENST00000449268 967 ntBASIC16.99■□□□□ 0.31
SUSD3Q96L08 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 AL450472.2-201ENST00000603663 1156 ntBASIC16.99■□□□□ 0.31
SUSD3Q96L08 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 PRORSD1P-202ENST00000563365 2154 ntBASIC16.99■□□□□ 0.31
SUSD3Q96L08 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SUSD3Q96L08 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms