Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 Z69720.1-201ENST00000601483 472 ntBASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP6Q96FZ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 AL390755.1-201ENST00000623716 2027 ntBASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 AC091951.1-201ENST00000512854 2465 ntBASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 KRT18P35-201ENST00000510488 1269 ntBASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 AC116407.4-201ENST00000623319 1061 ntBASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP6Q96FZ7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AC013726.1-201ENST00000563747 2285 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AL592424.1-201ENST00000563624 1536 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AL845331.1-201ENST00000424978 1190 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 TOB2P1-201ENST00000469761 992 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 MPDU1-223ENST00000582151 728 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AP002414.4-201ENST00000589764 1148 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 AP000550.4-202ENST00000639755 178 ntBASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP6Q96FZ7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms